diff --git a/dev-python/scipy/Manifest b/dev-python/scipy/Manifest
index 3a71502f3..b3b232bee 100644
--- a/dev-python/scipy/Manifest
+++ b/dev-python/scipy/Manifest
@@ -1,3 +1,2 @@
-DIST scipy-1.11.4.tar.gz 56336202 BLAKE2B a2091a1edb54eb73c2de6ed8c62a7e571f37b247c9af50947aa97b739342c96b87b20a82b1a238c859fa532c84249cbadde228366dcea3555e9a506c1ae55031 SHA512 2eb403f6de9723b411d948b8e1b5457078704c605b8e760d42362c82d802e167eaaf701ddb8b480af2bdf2efe4dbf66fcc4e97321519bb8dab19b0e2a8976beb
 DIST scipy-1.12.0.tar.gz 56811768 BLAKE2B 03c142274f1466747935fa54fab427f3a48c1642406211fa1a0f8ad5e0f194baecf76182e0448a0fb647063871483239cd876ce431cd9406e396e6170912ab64 SHA512 376ed94c4caaf782814bb07047fff0b363f7b608a0399697c6e862432333cbe6d3abb351730a574a3f077b3cdd9cb7474090a460baffcfbd5546bcfee309b6e7
 DIST scipy-html-1.11.2.zip 50435722 BLAKE2B 460c67509a8bf50986f866ee2f90e634af21ddd71508efeef5681c2ee2130c3f79b4b428bc21277bfb310bb45ccad1fb38221ada43620055377cdc4839b9d1e5 SHA512 986a6e37f9e01dc4925ef22af6ff660bae1e4b66e57270262974c207dfb70285e3f8f548774d6e81d5f457b9198c0ba1c06e6d689fe5d54fdea878c1e5a7f797
diff --git a/dev-python/scipy/scipy-1.11.4.ebuild b/dev-python/scipy/scipy-1.11.4.ebuild
deleted file mode 100644
index 5da0c44bf..000000000
--- a/dev-python/scipy/scipy-1.11.4.ebuild
+++ /dev/null
@@ -1,152 +0,0 @@
-# Copyright 1999-2024 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-FORTRAN_NEEDED=fortran
-DISTUTILS_EXT=1
-DISTUTILS_USE_PEP517=meson-python
-PYTHON_COMPAT=( pypy3 python3_{10..12} )
-PYTHON_REQ_USE="threads(+)"
-
-inherit flag-o-matic fortran-2 distutils-r1 multiprocessing
-
-DESCRIPTION="Scientific algorithms library for Python"
-HOMEPAGE="
-	https://scipy.org/
-	https://github.com/scipy/scipy/
-	https://pypi.org/project/scipy/
-"
-
-if [[ ${PV} == *9999* ]] ; then
-	inherit git-r3
-
-	# Need submodules, so git for now.
-	EGIT_REPO_URI="https://github.com/scipy/scipy"
-	EGIT_BRANCH="maintenance/$(ver_cut 1-2).x"
-	EGIT_SUBMODULES=( '*' )
-else
-	inherit pypi
-
-	# Upstream is often behind with doc updates
-	#DOC_PV=${PV}
-	DOC_PV=1.11.2
-
-	SRC_URI+="
-		doc? (
-			https://docs.scipy.org/doc/${PN}-${DOC_PV}/${PN}-html-${DOC_PV}.zip
-		)"
-
-	if [[ ${PV} != *rc* ]] ; then
-		KEYWORDS="amd64 arm arm64 ~loong ~ppc ppc64 ~riscv ~s390 ~sparc x86"
-	fi
-fi
-
-LICENSE="BSD LGPL-2"
-SLOT="0"
-IUSE="doc +fortran test-rust"
-
-# umfpack is technically optional but it's preferred to have it available.
-# forked for https://bugs.gentoo.org/922782
-DEPEND="
-	dev-cpp/xsimd
-	>=dev-python/numpy-1.21.6[lapack,${PYTHON_USEDEP}]
-	sci-libs/arpack:=
-	sci-libs/umfpack
-	virtual/cblas
-	>=virtual/lapack-3.8
-"
-RDEPEND="
-	${DEPEND}
-	dev-python/pillow[${PYTHON_USEDEP}]
-"
-BDEPEND="
-	dev-lang/swig
-	>=dev-python/cython-0.29.35[${PYTHON_USEDEP}]
-	>=dev-python/meson-python-0.12.1[${PYTHON_USEDEP}]
-	>=dev-python/pybind11-2.10.4[${PYTHON_USEDEP}]
-	>=dev-build/meson-1.1.0
-	!kernel_Darwin? ( dev-util/patchelf )
-	virtual/pkgconfig
-	doc? ( app-arch/unzip )
-	fortran? ( dev-python/pythran[${PYTHON_USEDEP}] )
-	test? (
-		dev-python/pytest-xdist[${PYTHON_USEDEP}]
-	)
-	test-rust? (
-		dev-python/pooch[${PYTHON_USEDEP}]
-	)
-"
-
-distutils_enable_tests pytest
-
-src_unpack() {
-	default
-
-	if use doc; then
-		unzip -qo "${DISTDIR}"/${PN}-html-${DOC_PV}.zip -d html || die
-	fi
-}
-
-python_configure_all() {
-	# https://github.com/scipy/scipy/pull/19857
-	# Fixed in 1.13.0
-	filter-lto
-	DISTUTILS_ARGS=(
-		-Dblas=blas
-		-Dlapack=lapack
-		-Duse-pythran=$(usex fortran true false)
-	)
-}
-
-python_test() {
-	cd "${BUILD_DIR}/install$(python_get_sitedir)" || die
-
-	local EPYTEST_DESELECT=(
-		# Network
-		scipy/datasets/tests/test_data.py::TestDatasets::test_existence_all
-		scipy/datasets/tests/test_data.py::TestDatasets::test_ascent
-		scipy/datasets/tests/test_data.py::TestDatasets::test_face
-		scipy/datasets/tests/test_data.py::TestDatasets::test_electrocardiogram
-
-		# Precision issue with diff. blas?
-		scipy/optimize/tests/test__basinhopping.py::Test_Metropolis::test_gh7799
-
-		# Crashes with assertion, not a regression
-		# https://github.com/scipy/scipy/issues/19321
-		scipy/signal/tests/test_signaltools.py::test_lfilter_bad_object
-
-		# timeouts
-		scipy/sparse/linalg/tests/test_propack.py::test_examples
-		# hang or incredibly slow
-		scipy/optimize/tests/test_lsq_linear.py::TestBVLS::test_large_rank_deficient
-		scipy/optimize/tests/test_lsq_linear.py::TestTRF::test_large_rank_deficient
-	)
-	local EPYTEST_IGNORE=()
-
-	if ! has_version -b "dev-python/pooch[${PYTHON_USEDEP}]" ; then
-		EPYTEST_IGNORE+=(
-			scipy/datasets/tests/test_data.py
-		)
-	fi
-
-	case ${EPYTHON} in
-		pypy3)
-			EPYTEST_DESELECT+=(
-				# fd leaks in tests
-				# https://github.com/scipy/scipy/issues/19553
-				scipy/fft/_pocketfft/tests/test_real_transforms.py
-				# TODO
-				'scipy/special/tests/test_data.py::test_boost[<Data for expi: expinti_data_long_ipp-expinti_data_long>]'
-			)
-			;;
-	esac
-
-	epytest -n "$(makeopts_jobs)" --dist=worksteal scipy
-}
-
-python_install_all() {
-	use doc && local HTML_DOCS=( "${WORKDIR}"/html/. )
-
-	distutils-r1_python_install_all
-}