mirror of
https://github.com/pentoo/pentoo-overlay
synced 2026-04-21 14:21:02 +02:00
unfork matplotlib and scipy, fixed properly in gentoo
This commit is contained in:
Rick Farina (Zero_Chaos)
parent
6ea283c439
commit
7b4a6e5a97
9 changed files with 0 additions and 508 deletions
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@ -1 +0,0 @@
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DIST matplotlib-2.2.4.tar.gz 36974286 BLAKE2B 9c4c69163a23ff02107ee155f72e142dcf31ba965f6a20f468b96f3f4b70b95ff6caade6b14bcbacd5b231848d2000ce6af9f113feefb41d6e186725349490d3 SHA512 968f5731b8a9a2c5575403c60d5b0a98a452b33094e520be44f4d901f892d082babc8fc1d73c519e1ff2baf756f3cb7652f4b796e166d66dfda31f7e50c58139
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@ -1,10 +0,0 @@
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diff -r -U2 matplotlib-2.1.2.orig/doc/conf.py matplotlib-2.1.2/doc/conf.py
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--- matplotlib-2.1.2.orig/doc/conf.py 2018-01-19 11:07:49.000000000 +0700
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+++ matplotlib-2.1.2/doc/conf.py 2018-01-21 20:06:44.120901546 +0700
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@@ -136,5 +136,5 @@
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}
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-plot_gallery = 'True'
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+plot_gallery = True
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# Add any paths that contain templates here, relative to this directory.
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@ -1,18 +0,0 @@
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diff --git a/doc/conf.py b/doc/conf.py
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index 017ce210e..5a397082b 100644
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--- a/doc/conf.py
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+++ b/doc/conf.py
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@@ -170,10 +170,10 @@ source_encoding = "utf-8"
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master_doc = 'contents'
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# General substitutions.
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-from matplotlib.compat.subprocess import check_output
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-SHA = check_output(['git', 'describe', '--dirty']).decode('utf-8').strip()
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+#from matplotlib.compat.subprocess import check_output
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+#SHA = check_output(['git', 'describe', '--dirty']).decode('utf-8').strip()
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-html_context = {'sha': SHA}
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+#html_context = {'sha': SHA}
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project = 'Matplotlib'
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copyright = ('2002 - 2012 John Hunter, Darren Dale, Eric Firing, '
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@ -1,18 +0,0 @@
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diff --git a/setup.py b/setup.py
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index 41037e95d..6a438fa99 100644
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--- a/setup.py
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+++ b/setup.py
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@@ -178,9 +178,10 @@ class sdist_with_jquery(_orgin_sdist):
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class install_lib_with_jquery(InstallLibCommand):
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def run(self):
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InstallLibCommand.run(self)
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- _download_jquery_to(
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- os.path.join(self.install_dir, "matplotlib/backends/web_backend/"))
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-
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+ # Avoid downloading jquery ui during emerge: we already have it in
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+ # pypi's tarball. use this!
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+ name = "matplotlib/backends/web_backend/jquery-ui-1.12.1"
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+ os.rename(os.path.join('lib', name), os.path.join(self.install_dir, name))
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class develop_with_jquery(DevelopCommand):
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def run(self):
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@ -1,263 +0,0 @@
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# Copyright 1999-2020 Gentoo Authors
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# Distributed under the terms of the GNU General Public License v2
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EAPI=6
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PYTHON_COMPAT=( python2_7 python3_{6,7} )
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PYTHON_REQ_USE='tk?,threads(+)'
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inherit distutils-r1 flag-o-matic virtualx toolchain-funcs prefix
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DESCRIPTION="Pure python plotting library with matlab like syntax"
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HOMEPAGE="https://matplotlib.org/"
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SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
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SLOT="0"
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# Main license: matplotlib
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# Some modules: BSD
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# matplotlib/backends/qt4_editor: MIT
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# Fonts: BitstreamVera, OFL-1.1
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LICENSE="BitstreamVera BSD matplotlib MIT OFL-1.1"
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KEYWORDS="~amd64 ~arm ~arm64 ~ppc ~ppc64 ~x86"
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IUSE="cairo doc excel examples gtk2 gtk3 latex qt5 test tk wxwidgets"
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RESTRICT="!test? ( test )"
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PY2_FLAGS="|| ( $(python_gen_useflags python2_7) )"
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REQUIRED_USE="
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gtk2? ( ${PY2_FLAGS} )
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wxwidgets? ( ${PY2_FLAGS} )
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test? (
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cairo latex qt5 tk wxwidgets
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|| ( gtk2 gtk3 )
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)"
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# #456704 -- a lot of py2-only deps
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PY2_USEDEP=$(python_gen_usedep python2_7)
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PY2_DEPEND="
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$(python_gen_cond_dep 'dev-python/functools32[${PYTHON_USEDEP}]' python2_7)
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$(python_gen_cond_dep 'dev-python/subprocess32[${PYTHON_USEDEP}]' python2_7)
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$(python_gen_cond_dep 'dev-python/backports-functools-lru-cache[${PYTHON_USEDEP}]' python2_7)"
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COMMON_DEPEND="
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dev-python/cycler[${PYTHON_USEDEP}]
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$(python_gen_cond_dep 'dev-python/numpy-python2[${PYTHON_USEDEP}]' 'python2*')
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$(python_gen_cond_dep 'dev-python/numpy[${PYTHON_USEDEP}]' 'python3*')
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dev-python/python-dateutil:0[${PYTHON_USEDEP}]
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dev-python/pytz[${PYTHON_USEDEP}]
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>=dev-python/six-1.10[${PYTHON_USEDEP}]
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media-fonts/stix-fonts
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media-libs/freetype:2
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media-libs/libpng:0
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>=media-libs/qhull-2013
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>=dev-python/kiwisolver-1.0.0[${PYTHON_USEDEP}]
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cairo? ( dev-python/cairocffi[${PYTHON_USEDEP}] )
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gtk2? (
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dev-libs/glib:2=
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x11-libs/gdk-pixbuf
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x11-libs/gtk+:2
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dev-python/pygtk[${PY2_USEDEP}] )
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wxwidgets? ( >=dev-python/wxpython-2.8:*[${PY2_USEDEP}] )"
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# internal copy of pycxx highly patched
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# dev-python/pycxx
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DEPEND="${COMMON_DEPEND}
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${PY2_DEPEND}
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dev-python/versioneer[${PYTHON_USEDEP}]
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dev-python/setuptools[${PYTHON_USEDEP}]
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virtual/pkgconfig
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doc? (
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app-text/dvipng
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dev-python/colorspacious[${PYTHON_USEDEP}]
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dev-python/pillow[${PYTHON_USEDEP}]
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dev-python/ipython[${PYTHON_USEDEP}]
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dev-python/mock[${PY2_USEDEP}]
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>=dev-python/numpydoc-0.8[${PYTHON_USEDEP}]
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<dev-python/numpydoc-0.9
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sci-libs/scipy[${PYTHON_USEDEP}]
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>=dev-python/sphinx-1.3.0[${PYTHON_USEDEP}]
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>=dev-python/sphinx-gallery-0.3.1[${PYTHON_USEDEP}]
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dev-python/xlwt[${PYTHON_USEDEP}]
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dev-texlive/texlive-latexextra
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dev-texlive/texlive-fontsrecommended
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dev-texlive/texlive-latexrecommended
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media-gfx/graphviz[cairo]
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)
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test? (
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dev-python/mock[${PYTHON_USEDEP}]
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>=dev-python/nose-0.11.1[${PYTHON_USEDEP}]
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)"
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RDEPEND="${COMMON_DEPEND}
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${PY2_DEPEND}
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>=dev-python/pyparsing-1.5.6[${PYTHON_USEDEP}]
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excel? ( dev-python/xlwt[${PYTHON_USEDEP}] )
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gtk3? (
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dev-python/pygobject:3[${PYTHON_USEDEP}]
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x11-libs/gtk+:3[introspection] )
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latex? (
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virtual/latex-base
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app-text/ghostscript-gpl
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app-text/dvipng
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app-text/poppler[utils]
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dev-texlive/texlive-fontsrecommended
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dev-texlive/texlive-latexextra
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dev-texlive/texlive-xetex
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)
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qt5? ( dev-python/PyQt5[gui,widgets,${PYTHON_USEDEP}] )"
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# A few C++ source files are written to srcdir.
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# Other than that, the ebuild shall be fit for out-of-source build.
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DISTUTILS_IN_SOURCE_BUILD=1
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pkg_setup() {
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unset DISPLAY # bug #278524
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}
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use_setup() {
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local uword="${2:-${1}}"
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if use ${1}; then
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echo "${uword} = True"
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echo "${uword}agg = True"
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else
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echo "${uword} = False"
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echo "${uword}agg = False"
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fi
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}
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python_prepare_all() {
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# Generates test failures, but fedora does it
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# local PATCHES=(
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# "${FILESDIR}"/${P}-unbundle-pycxx.patch
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# "${FILESDIR}"/${P}-unbundle-agg.patch
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# )
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# rm -r agg24 CXX || die
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# rm -r agg24 || die
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# cat > lib/${PN}/externals/six.py <<-EOF
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# from __future__ import absolute_import
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# from six import *
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# EOF
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local PATCHES=(
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"${FILESDIR}"/${PN}-2.2.4-doc-fix.patch
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"${FILESDIR}"/${PN}-2.2.4-no-jqueryui-download.patch
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)
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sed \
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-e 's/matplotlib.pyparsing_py[23]/pyparsing/g' \
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-i lib/matplotlib/{mathtext,fontconfig_pattern}.py \
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|| die "sed pyparsing failed"
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hprefixify setupext.py
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export XDG_RUNTIME_DIR="${T}/runtime-dir"
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mkdir "${XDG_RUNTIME_DIR}" || die
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chmod 0700 "${XDG_RUNTIME_DIR}" || die
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distutils-r1_python_prepare_all
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}
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python_configure_all() {
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append-flags -fno-strict-aliasing
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append-cppflags -DNDEBUG # or get old trying to do triangulation
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tc-export PKG_CONFIG
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}
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python_configure() {
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mkdir -p "${BUILD_DIR}" || die
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# create setup.cfg (see setup.cfg.template for any changes).
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# common switches.
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cat > "${BUILD_DIR}"/setup.cfg <<- EOF || die
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[directories]
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basedirlist = ${EPREFIX}/usr
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[provide_packages]
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pytz = False
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dateutil = False
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[packages]
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tests = $(usex test True False)
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[gui_support]
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agg = True
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pyside = False
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pysideagg = False
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qt4 = False
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qt4agg = False
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$(use_setup cairo)
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$(use_setup gtk3)
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$(use_setup qt5)
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$(use_setup tk)
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EOF
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if use gtk3 && use cairo; then
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echo "gtk3cairo = True" >> "${BUILD_DIR}"/setup.cfg || die
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else
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echo "gtk3cairo = False" >> "${BUILD_DIR}"/setup.cfg || die
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fi
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if python_is_python3; then
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cat >> "${BUILD_DIR}"/setup.cfg <<- EOF || die
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gtk = False
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gtkagg = False
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wx = False
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wxagg = False
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EOF
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else
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cat >> "${BUILD_DIR}"/setup.cfg <<-EOF || die
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$(use_setup gtk2 gtk)
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$(use_setup wxwidgets wx)
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EOF
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fi
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}
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wrap_setup() {
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local MAKEOPTS=-j1
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local -x MPLSETUPCFG="${BUILD_DIR}"/setup.cfg
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unset DISPLAY
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"$@"
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}
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python_compile() {
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wrap_setup distutils-r1_python_compile --build-lib="${BUILD_DIR}"/lib
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}
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python_compile_all() {
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if use doc; then
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cd doc || die
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# necessary for in-source build
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local -x PYTHONPATH="${BUILD_DIR}"/build/lib:${PYTHONPATH}
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VARTEXFONTS="${T}"/fonts \
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emake SPHINXOPTS= O=-Dplot_formats=png:100 html
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fi
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}
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python_test() {
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wrap_setup distutils_install_for_testing
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virtx "${EPYTHON}" -c "import sys, matplotlib as m; sys.exit(0 if m.test(verbosity=2) else 1)"
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}
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python_install() {
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wrap_setup distutils-r1_python_install
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# mpl_toolkits namespace
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python_moduleinto mpl_toolkits
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python_domodule lib/mpl_toolkits/__init__.py
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}
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python_install_all() {
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use doc && local HTML_DOCS=( doc/build/html/. )
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distutils-r1_python_install_all
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if use examples; then
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dodoc -r examples
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docompress -x /usr/share/doc/${PF}/examples
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fi
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find "${D}" -name '*.pth' -delete || die
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}
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@ -1,27 +0,0 @@
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<?xml version="1.0" encoding="UTF-8"?>
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<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
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<pkgmetadata>
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<maintainer type="project">
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<email>sci@gentoo.org</email>
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<name>Gentoo Science Project</name>
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</maintainer>
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<maintainer type="project">
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<email>python@gentoo.org</email>
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<name>Python</name>
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</maintainer>
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<longdescription lang="en">
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matplotlib is an interactive library for plotting and doing basic
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data analysis in python with a syntax similar to matlab. It provides a
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variety of backends and hard copy formats for almost ready
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publication plots.
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</longdescription>
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<use>
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<flag name="excel">Pull <pkg>dev-python/xlwt</pkg> for the exceltools toolkit</flag>
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<flag name="gtk2">Enable <pkg>x11-libs/gtk+</pkg>:2 support</flag>
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<flag name="gtk3">Enable <pkg>x11-libs/gtk+</pkg>:3 support</flag>
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</use>
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<upstream>
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<remote-id type="pypi">matplotlib</remote-id>
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<remote-id type="sourceforge">matplotlib</remote-id>
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</upstream>
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</pkgmetadata>
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@ -1,3 +0,0 @@
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DIST scipy-1.1.0-html.zip 49851258 BLAKE2B 528df7ed8aa8e56662f436f31ee9e1d6d72d6fe962f9f0f6f84b7a2704b53009ce333b2102ec73bb7795110f8a61b18246aab95b1e21055f2b68c0ff2225b7bb SHA512 a03894a22a67c1359ee6206e9e1c9de1f926a7f829f5039f161e78df735708da09b0e51cdad3bf36bfede701d0bc5dc44f8cc0f249b6bfb80c9d8c9fe23aed46
|
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DIST scipy-1.1.0-ref.pdf 34360806 BLAKE2B f82807879d5d36d91d74e8983a0f4104bcb4b69cb7787fe5190f73fbbfcb8635a9399686b3c75736d3b0b5dd877b5280ff6fba728520e3b47c13ffc7835f8cd6 SHA512 c792064c986dffafa3c5d0741f30715028e655761d099f0fdd472270cf34642b367dfa2178ddceba13043a471e3aeb1db20d65308dbb40c704dab576aaadeb3e
|
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DIST scipy-1.1.0.tar.gz 15583560 BLAKE2B 477753e622ee26a3bc8c2cb6829410152df84b29ce17a6d53a66348f5536f7993fedf5d32b782405b54b3af3feabf9bc91c381ed39546076849c2fdb71039404 SHA512 72fe32c6c009613cb78202598e5db14f8e630b3218839cfe18d43d40550d94cc5aa100c6f5d41f40e86ae148e9b6a13431bb91b0f9be44b0569ccd7b725fe973
|
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|
|
@ -1,23 +0,0 @@
|
|||
<?xml version="1.0" encoding="UTF-8"?>
|
||||
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
|
||||
<pkgmetadata>
|
||||
<maintainer type="project">
|
||||
<email>sci@gentoo.org</email>
|
||||
<name>Gentoo Science Project</name>
|
||||
</maintainer>
|
||||
<longdescription lang="en">
|
||||
SciPy is an open source library of scientific tools for Python. SciPy
|
||||
supplements the popular numpy module, gathering a variety of high level
|
||||
science and engineering modules together as a single package.
|
||||
SciPy includes modules for graphics and plotting, optimization,
|
||||
integration, special functions, signal and image processing, genetic
|
||||
algorithms, ODE solvers, and others.
|
||||
</longdescription>
|
||||
<use>
|
||||
<flag name="sparse">Adds support for sparse solving with <pkg>sci-libs/umfpack</pkg></flag>
|
||||
</use>
|
||||
<upstream>
|
||||
<remote-id type="pypi">scipy</remote-id>
|
||||
<remote-id type="sourceforge">scipy</remote-id>
|
||||
</upstream>
|
||||
</pkgmetadata>
|
||||
|
|
@ -1,145 +0,0 @@
|
|||
# Copyright 1999-2020 Gentoo Authors
|
||||
# Distributed under the terms of the GNU General Public License v2
|
||||
|
||||
EAPI=6
|
||||
|
||||
PYTHON_COMPAT=( python2_7 python3_{6,7} )
|
||||
PYTHON_REQ_USE="threads(+)"
|
||||
|
||||
DOC_PV=${PV}
|
||||
|
||||
inherit fortran-2 distutils-r1 flag-o-matic multiprocessing toolchain-funcs
|
||||
|
||||
DESCRIPTION="Scientific algorithms library for Python"
|
||||
HOMEPAGE="https://www.scipy.org/"
|
||||
SRC_URI="
|
||||
mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz
|
||||
doc? (
|
||||
https://docs.scipy.org/doc/${PN}-${DOC_PV}/${PN}-html-${PV}.zip -> ${PN}-${DOC_PV}-html.zip
|
||||
https://docs.scipy.org/doc/${PN}-${DOC_PV}/${PN}-ref-${PV}.pdf -> ${PN}-${DOC_PV}-ref.pdf
|
||||
)"
|
||||
|
||||
LICENSE="BSD LGPL-2"
|
||||
SLOT="0"
|
||||
IUSE="doc sparse test"
|
||||
RESTRICT="!test? ( test )"
|
||||
KEYWORDS="amd64 ~arm ppc ppc64 x86 ~amd64-linux ~x86-linux ~ppc-macos ~x86-macos"
|
||||
|
||||
|
||||
CDEPEND="
|
||||
$(python_gen_cond_dep 'dev-python/numpy-python2[${PYTHON_USEDEP}]' python2_7)
|
||||
$(python_gen_cond_dep 'dev-python/numpy[lapack,${PYTHON_USEDEP}]' 'python3*')
|
||||
|
||||
sci-libs/arpack:0=
|
||||
virtual/cblas
|
||||
virtual/lapack
|
||||
sparse? ( sci-libs/umfpack:0= )"
|
||||
DEPEND="${CDEPEND}
|
||||
dev-lang/swig
|
||||
>=dev-python/cython-0.22[${PYTHON_USEDEP}]
|
||||
>=dev-python/setuptools-36[${PYTHON_USEDEP}]
|
||||
virtual/pkgconfig
|
||||
doc? ( app-arch/unzip )
|
||||
test? (
|
||||
dev-python/nose[${PYTHON_USEDEP}]
|
||||
dev-python/pytest[${PYTHON_USEDEP}]
|
||||
)"
|
||||
RDEPEND="${CDEPEND}
|
||||
dev-python/pillow[${PYTHON_USEDEP}]"
|
||||
|
||||
DOCS=( HACKING.rst.txt THANKS.txt )
|
||||
|
||||
DISTUTILS_IN_SOURCE_BUILD=1
|
||||
|
||||
src_unpack() {
|
||||
default
|
||||
if use doc; then
|
||||
unzip -qo "${DISTDIR}"/${PN}-${DOC_PV}-html.zip -d html || die
|
||||
fi
|
||||
}
|
||||
|
||||
pc_incdir() {
|
||||
$(tc-getPKG_CONFIG) --cflags-only-I $@ | \
|
||||
sed -e 's/^-I//' -e 's/[ ]*-I/:/g' -e 's/[ ]*$//' -e 's|^:||'
|
||||
}
|
||||
|
||||
pc_libdir() {
|
||||
$(tc-getPKG_CONFIG) --libs-only-L $@ | \
|
||||
sed -e 's/^-L//' -e 's/[ ]*-L/:/g' -e 's/[ ]*$//' -e 's|^:||'
|
||||
}
|
||||
|
||||
pc_libs() {
|
||||
$(tc-getPKG_CONFIG) --libs-only-l $@ | \
|
||||
sed -e 's/[ ]-l*\(pthread\|m\)\([ ]\|$\)//g' \
|
||||
-e 's/^-l//' -e 's/[ ]*-l/,/g' -e 's/[ ]*$//' \
|
||||
| tr ',' '\n' | sort -u | tr '\n' ',' | sed -e 's|,$||'
|
||||
}
|
||||
|
||||
python_prepare_all() {
|
||||
# scipy automatically detects libraries by default
|
||||
export {FFTW,FFTW3,UMFPACK}=None
|
||||
use sparse && unset UMFPACK
|
||||
# the missing symbols are in -lpythonX.Y, but since the version can
|
||||
# differ, we just introduce the same scaryness as on Linux/ELF
|
||||
[[ ${CHOST} == *-darwin* ]] \
|
||||
&& append-ldflags -bundle "-undefined dynamic_lookup" \
|
||||
|| append-ldflags -shared
|
||||
[[ -z ${FC} ]] && export FC="$(tc-getFC)"
|
||||
# hack to force F77 to be FC until bug #278772 is fixed
|
||||
[[ -z ${F77} ]] && export F77="$(tc-getFC)"
|
||||
export F90="${FC}"
|
||||
export SCIPY_FCONFIG="config_fc --noopt --noarch"
|
||||
append-fflags -fPIC
|
||||
|
||||
local libdir="${EPREFIX}"/usr/$(get_libdir)
|
||||
cat >> site.cfg <<-EOF || die
|
||||
[blas]
|
||||
include_dirs = $(pc_incdir cblas)
|
||||
library_dirs = $(pc_libdir cblas blas):${libdir}
|
||||
blas_libs = $(pc_libs cblas blas)
|
||||
[lapack]
|
||||
library_dirs = $(pc_libdir lapack):${libdir}
|
||||
lapack_libs = $(pc_libs lapack)
|
||||
EOF
|
||||
|
||||
# Drop hashes to force rebuild of cython based .c code
|
||||
rm cythonize.dat || die
|
||||
|
||||
distutils-r1_python_prepare_all
|
||||
}
|
||||
|
||||
python_compile() {
|
||||
# FIXME: parallel python building fails, bug #614464
|
||||
${EPYTHON} tools/cythonize.py || die
|
||||
distutils-r1_python_compile \
|
||||
${SCIPY_FCONFIG}
|
||||
}
|
||||
|
||||
python_test() {
|
||||
# fails with bdist_egg. should it be fixed in distutils-r1 eclass?
|
||||
distutils_install_for_testing ${SCIPY_FCONFIG}
|
||||
cd "${TEST_DIR}" || die "no ${TEST_DIR} available"
|
||||
"${PYTHON}" -c \
|
||||
'import numpy as np; print("relaxed strides checking:", np.ones((10,1),order="C").flags.f_contiguous)' \
|
||||
|| die
|
||||
"${EPYTHON}" -c \
|
||||
"import scipy, sys; r = scipy.test('fast', verbose=2); sys.exit(r)" \
|
||||
|| die "Tests fail with ${EPYTHON}"
|
||||
}
|
||||
|
||||
python_install_all() {
|
||||
use doc && \
|
||||
local DOCS=( "${DISTDIR}"/${PN}-${DOC_PV}-ref.pdf ) \
|
||||
local HTML_DOCS=( "${WORKDIR}"/html/. )
|
||||
distutils-r1_python_install_all
|
||||
}
|
||||
|
||||
python_install() {
|
||||
distutils-r1_python_install ${SCIPY_FCONFIG}
|
||||
}
|
||||
|
||||
pkg_postinst() {
|
||||
elog "You might want to set the variable SCIPY_PIL_IMAGE_VIEWER"
|
||||
elog "to your prefered image viewer. Example:"
|
||||
elog "\t echo \"export SCIPY_PIL_IMAGE_VIEWER=display\" >> ~/.bashrc"
|
||||
}
|
||||
Loading…
Reference in a new issue