diff --git a/build.gradle.kts b/build.gradle.kts
index d843a6340..1c170234c 100644
--- a/build.gradle.kts
+++ b/build.gradle.kts
@@ -45,6 +45,10 @@ allprojects {
 
   configure<org.jlleitschuh.gradle.ktlint.KtlintExtension> {
     version = "1.5.0"
+    filter {
+      exclude("**/generated-src/**")
+      exclude("**/generated/**")
+    }
   }
 }
 
diff --git a/komga/build.gradle.kts b/komga/build.gradle.kts
index c363dbe03..98b279a5a 100644
--- a/komga/build.gradle.kts
+++ b/komga/build.gradle.kts
@@ -374,6 +374,9 @@ sourceSets {
     }
   }
 }
+tasks.runKtlintFormatOverMainSourceSet {
+  dependsOn("generateTasksJooq")
+}
 tasks.runKtlintCheckOverMainSourceSet {
   dependsOn("generateTasksJooq")
 }